CDS

Accession Number TCMCG010C27444
gbkey CDS
Protein Id XP_016538295.1
Location complement(join(125743022..125743285,125743847..125743996,125744077..125744136,125748049..125748099,125748255..125748326,125750025..125750091,125751111..125751193,125751385..125751501,125752107..125752148,125752910..125752975,125753064..125753189,125753290..125753361,125753992..125754038,125754125..125754190,125754270..125754342,125755550..125755621,125755746..125755891,125756986..125757079,125759260..125759334,125760573..125760656,125760807..125760809))
Gene LOC107839361
GeneID 107839361
Organism Capsicum annuum

Protein

Length 609aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016682809.1
Definition PREDICTED: THO complex subunit 1 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category Y
Description THO complex subunit 1 transcription elongation factor
KEGG_TC -
KEGG_Module M00405        [VIEW IN KEGG]
M00406        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12878        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000160        [VIEW IN EMBL-EBI]
GO:0000347        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009873        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071369        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTGTTTAGGCAGGCTATTCTTCGCCCAGAGCCACCTGAAGAATTCGCTCTTCTTACTGTTCAACAAGCTATTAACCCTCAGAAGCAAACAAAGCTAGTCCAAGATGAGAATCAGCTATTGGAAAATATTCTCAGGTCGCTACTTCAAGAACTGGTGGCTGCTGCGGTTCAGTCAGGGCAGAAAGTCATGCAGTATGGAGTGTCAATTGCTGATGGTGAATCAAGTCAGGGTCAGATTCCCCGCCTTCTTGATATTGTTCTATATCTTTGTGAGAAAGAACATGTGGAAGGTGGCATGATATTTCAACTTCTGGAGGATTTGACAGAAATGTCAACAATGAGAAATTGTGAGGATGTTTTTGGGTACATAGAGAGCAAACAAGACATATTGGGGAAGCCAGAACTCTTTGCACGAGGAAAGCTTGTTATGTTAAGGACGTGTAATCAGTTGCTTCGTCGTCTATCAAAGGCAAATGATGTTGTCTTCTGTGGTCGCATTATCATGTTTCTTGCTCACTTCTTCCCCTTATCTGAGCGTTCTGCTGTAAATATAAAGGGAGTTTTCAATACATCGAATGAGACAAAATATGAGACAGAAGCGCCTGAGGGTATTTCTATTGATTTCAACTTCTATAAAACACTTTGGAGTCTACAGGAATACTTCTGCAATCCGCCATCCCTGGTTAATGCTCCCGGCAAGTGGCACAAATTTACATCCAGTTTGATGGTCGTTCTAAATACTTTTGAGGCTCAGCCTTTAAGTGATGAAGAGGGAAATGCTCATAACCTTGAGGATGACGCTGCAACCTTTAACATAAAGTATCTTACAAGCAGTAAACTTATGGGTCTCGAGCTAAAAGATCCTAGTTTCAGGCGCCACGTTCTGGTTCAGTGCCTCATTCTGTTCGACTATTTGAAGGCGCCAGGGAAAAGTGAGAAGGAATTGCCCTCTGAAGCAATGGAGGAGGAAATAAAGACTAGTGAAGAGCGGGTAAAGAAGCTTCTTGAAATGACTCCACCTAAAGGCATAGATTTCCTCCGCAGTATTGAGCACATTTTGGAGCGTGAAAGGAATTGGGTTTGGTGGAAACGTGATGGCTGCCCCCCATTTGAGAAGCAACCAGAAGAGAAAAAGCTGGTTCAAGATGGAACCAAAAAACGTCGGCCACGATGGAGGCTTGGAAACAAAGAACTCTCCCAATTGTGGAGATGGGCTGATCAGTATCCGGATGCTTTAACTGATACTAAACGTGTGTGCACTCCCTCTATCACAGATTACTGGAAACCTCTGGCCGAAGATATGGATGAATCTGCTGGAATAGAAGCAGAATACCATCACAAAAACAATCGGGTCTATTGTTGGAAAGGTTTGCGGTTTTCAGCCCGACAAGACTTGGAGGGATTTTCCAGATTTACAGAACATGGTATTGAGGGGGTAGTGCCTCTGGAGCTTTTGCCTACTGAAGTACGGGCCAAATATCAAGCTAAACCAAGTGAAAGGACCAAGCGGATTAAGAAGGAGGAAACAAAAAATTCAGCGCAACAAGCAGAAGAAAATCAGATTGCAACACCACCAAGTGAGATAGACAATGAAGTGAGCCGAGCAGATCTTGAAGCATCAGCTGCCCCCATGGAAACGGATGCAGGGATTGCTACTGTTAATATATCTCAGGACGAAACTCCAACTCCAGAGGATAACCCGAAGCAAAGCTCTGATACAGATGTTGCTCAAGAAGCAGGGCAGACTGAAGCAGACACAGAAGCAGAGACGGGGTTGATTGATGGAGAAACAGATGCAGAAGTTGATCTAGATGCAGTAGGTTAA
Protein:  
MDLFRQAILRPEPPEEFALLTVQQAINPQKQTKLVQDENQLLENILRSLLQELVAAAVQSGQKVMQYGVSIADGESSQGQIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCEDVFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSAVNIKGVFNTSNETKYETEAPEGISIDFNFYKTLWSLQEYFCNPPSLVNAPGKWHKFTSSLMVVLNTFEAQPLSDEEGNAHNLEDDAATFNIKYLTSSKLMGLELKDPSFRRHVLVQCLILFDYLKAPGKSEKELPSEAMEEEIKTSEERVKKLLEMTPPKGIDFLRSIEHILERERNWVWWKRDGCPPFEKQPEEKKLVQDGTKKRRPRWRLGNKELSQLWRWADQYPDALTDTKRVCTPSITDYWKPLAEDMDESAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSRFTEHGIEGVVPLELLPTEVRAKYQAKPSERTKRIKKEETKNSAQQAEENQIATPPSEIDNEVSRADLEASAAPMETDAGIATVNISQDETPTPEDNPKQSSDTDVAQEAGQTEADTEAETGLIDGETDAEVDLDAVG